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About: PipMaker

Module by: Susan Cates. E-mail the author

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Name: PipMaker
ID: m11027
Language: English (en)
Summary: This module is an introduction to the pip, or percent identity plot. The PipMaker tool available through the Penn State Bioinformatics Group web site is used to create a pip using sample reference and query sequences.
Subject: Science and Technology
Keywords: nucleotide sequence, percent identity plot, pip, sequence alignment
Document Type: -//CNX//DTD CNXML 0.5 plus MathML//EN
License: Creative Commons Attribution License CC-BY 1.0

Authors: Susan Cates (mscates@bioc.rice.edu)
Copyright Holders: Susan Cates (mscates@bioc.rice.edu)
Maintainers: Susan Cates (mscates@bioc.rice.edu)

Latest version: 2.5 (history)
First publication date: Jan 24, 2003 12:00 am US/Central
Last revision to module: Sep 10, 2008 3:35 pm GMT-5

Module XML: m11027_2.5.cnxml

Version History

Version: 2.5 Sep 10, 2008 3:35 pm GMT-5 by Susan Cates
Changes:
MINOR EDITS

Version: 2.4 Jan 24, 2005 2:02 pm US/Central by Susan Cates
Changes:
used <exercise> tag on questions

Version: 2.3 Jan 16, 2004 3:40 pm US/Central by Susan Cates
Changes:
downloaded a copy

Version: 2.2 Jan 16, 2004 3:34 pm US/Central by Susan Cates
Changes:
update to cnxml 0.5

Version: 2.1 Jan 30, 2003 12:00 am US/Central by (Unknown)
Changes:
improved formatting using codeblock for nucleotide sequences

Version: 2.0 Jan 24, 2003 12:00 am US/Central by (Unknown)
Changes:
PipMaker, V1

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  • the authors' names: Susan Cates
  • the title of the work: PipMaker
  • the Connexions URL where the work can be found: http://cnx.org/content/m11027/2.5/

See the citation section below for examples you can copy.

How to Cite and Attribute This Content

The following citation styles comply with the attribution requirements for the license (CC-BY 1.0) of this work:

American Chemical Society (ACS) Style Guide:

Cates, S. PipMaker, Connexions Web site. http://cnx.org/content/m11027/2.5/, Sep 10, 2008.

American Medical Assocation (AMA) Manual of Style:

Cates S. PipMaker [Connexions Web site]. September 10, 2008. Available at: http://cnx.org/content/m11027/2.5/.

American Psychological Assocation (APA) Publication Manual:

Cates, S. (2008, September 10). PipMaker. Retrieved from the Connexions Web site: http://cnx.org/content/m11027/2.5/

Chicago Manual of Style (Bibliography):

Cates, Susan. "PipMaker." Connexions. September 10, 2008. http://cnx.org/content/m11027/2.5/.

Chicago Manual of Style (Note):

Susan Cates, "PipMaker," Connexions, September 10, 2008, http://cnx.org/content/m11027/2.5/.

Chicago Manual of Style (Reference, in Author-Date style):

Cates, S. 2008. PipMaker. Connexions, September 10, 2008. http://cnx.org/content/m11027/2.5/.

Modern Languages Association (MLA) Style Manual:

Cates, Susan. PipMaker. Connexions. 10 Sep. 2008 <http://cnx.org/content/m11027/2.5/>.