Connexions

Sections
You are here: Home » Content » PipMaker

About: PipMaker

Module by: Susan Cates. E-mail the author

View content

Metadata

Name: PipMaker
ID: m11027
Language: English (en)
Summary: This module is an introduction to the pip, or percent identity plot. The PipMaker tool available through the Penn State Bioinformatics Group web site is used to create a pip using sample reference and query sequences.
Subject: Science and Technology
Keywords: nucleotide sequence, percent identity plot, pip, sequence alignment
Document Type: -//CNX//DTD CNXML 0.5 plus MathML//EN
License: Creative Commons Attribution License CC-BY 1.0
Authors: Susan Cates (mscates@bioc.rice.edu)
Copyright Holders: Susan Cates (mscates@bioc.rice.edu)
Maintainers: Susan Cates (mscates@bioc.rice.edu)
Latest version: 2.5 (history)
First publication date: Jan 24, 2003 12:00 am US/Central
Last revision to module: Sep 10, 2008 3:35 pm GMT-5
Module XML: m11027_2.5.cnxml

Version History

Version: 2.5 Sep 10, 2008 3:35 pm GMT-5 by Susan Cates
Changes: 
MINOR EDITS
Version: 2.4 Jan 24, 2005 2:02 pm US/Central by Susan Cates
Changes: 
used <exercise> tag on questions
Version: 2.3 Jan 16, 2004 3:40 pm US/Central by Susan Cates
Changes: 
downloaded a copy
Version: 2.2 Jan 16, 2004 3:34 pm US/Central by Susan Cates
Changes: 
update to cnxml 0.5
Version: 2.1 Jan 30, 2003 12:00 am US/Central by (Unknown)
Changes: 
improved formatting using codeblock for nucleotide sequences
Version: 2.0 Jan 24, 2003 12:00 am US/Central by (Unknown)
Changes: 
PipMaker, V1

How to Reuse and Attribute This Content

If you derive a copy of this content using a Connexions account and publish your version, proper attribution of the original work will be automatically done for you.

If you reuse this work elsewhere, in order to comply with the attribution requirements of the license (CC-BY 1.0), you must include

  • the authors' names: Susan Cates
  • the title of the work: PipMaker
  • the Connexions URL where the work can be found: http://cnx.org/content/m11027/2.5/

See the citation section below for examples you can copy.

How to Cite and Attribute This Content

The following citation styles comply with the attribution requirements for the license (CC-BY 1.0) of this work:

American Chemical Society (ACS) Style Guide:

Cates, S. PipMaker, Connexions Web site. http://cnx.org/content/m11027/2.5/, Sep 10, 2008.

American Medical Assocation (AMA) Manual of Style:

Cates S. PipMaker [Connexions Web site]. September 10, 2008. Available at: http://cnx.org/content/m11027/2.5/.

American Psychological Assocation (APA) Publication Manual:

Cates, S. (2008, September 10). PipMaker. Retrieved from the Connexions Web site: http://cnx.org/content/m11027/2.5/

Chicago Manual of Style (Bibliography):

Cates, Susan. "PipMaker." Connexions. September 10, 2008. http://cnx.org/content/m11027/2.5/.

Chicago Manual of Style (Note):

Susan Cates, "PipMaker," Connexions, September 10, 2008, http://cnx.org/content/m11027/2.5/.

Chicago Manual of Style (Reference, in Author-Date style):

Cates, S. 2008. PipMaker. Connexions, September 10, 2008. http://cnx.org/content/m11027/2.5/.

Modern Languages Association (MLA) Style Manual:

Cates, Susan. PipMaker. Connexions. 10 Sep. 2008 <http://cnx.org/content/m11027/2.5/>.