About: Scoring Matrices
Metadata
| Name: | Scoring Matrices |
| ID: | m11062 |
| Language: | English (en) |
| Summary: | This module explains the general characteristics of the scoring matrices used to score sequence alignments. Guidelines are given to help the student choose which scoring scheme to choose for a given alignment, according to the characteristics of the sequences to be aligned. |
| Subject: | Science and Technology |
| Keywords: | bioinformatics, BLOSUM, PAM, scoring matrix, sequence alignment, substitution matrix |
| Document Type: | -//CNX//DTD CNXML 0.5 plus MathML//EN |
| License: | Creative Commons Attribution License (CC-BY 1.0) |
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| Authors: | Susan Cates (mscates@bioc.rice.edu) |
| Copyright Holders: | Susan Cates (mscates@bioc.rice.edu) |
| Maintainers: | Susan Cates (mscates@bioc.rice.edu) |
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| Version: | 2.6 (history) |
| Created: | Feb 27, 2003 12:00 am US/Central |
| Revised: | Sep 12, 2007 11:34 am GMT-5 |
Version History
| Version: | 2.6 Sep 12, 2007 11:34 am GMT-5 by Susan Cates |
| Changes: | included better workbench instructions |
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| Version: | 2.5 Feb 13, 2006 1:09 pm US/Central by Susan Cates |
| Changes: | updated old links |
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| Version: | 2.4 Feb 9, 2005 4:56 pm US/Central by Susan Cates |
| Changes: | updated links, converted questions to <exercise> and <problem> format |
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| Version: | 2.3 Feb 18, 2004 2:37 pm US/Central by Susan Cates |
| Changes: | updated |
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| Version: | 2.2 Mar 3, 2003 12:00 am US/Central by Susan Cates |
| Changes: | reworded last sample problem |
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| Version: | 2.1 Feb 28, 2003 12:00 am US/Central by Susan Cates |
| Changes: | minor editing |
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| Version: | 2.0 Feb 27, 2003 12:00 am US/Central by Susan Cates |
| Changes: | v1 |
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How to Cite and Attribute This Content
The following citation styles comply with the attribution requirements for the license (CC-BY 1.0) of this work:
American Chemical Society (ACS) Style Guide:
Cates, S. Scoring Matrices, Connexions Web site. http://cnx.org/content/m11062/2.6/, Sep 12, 2007.
American Medical Assocation (AMA) Manual of Style:
Cates S. Scoring Matrices [Connexions Web site]. September 12, 2007. Available at: http://cnx.org/content/m11062/2.6/.
American Psychological Assocation (APA) Publication Manual:
Cates, S. (2007, September 12). Scoring Matrices. Retrieved from the Connexions Web site: http://cnx.org/content/m11062/2.6/
Chicago Manual of Style (Bibliography):
Cates, Susan. "Scoring Matrices." Connexions. September 12, 2007. http://cnx.org/content/m11062/2.6/.
Chicago Manual of Style (Note):
Susan Cates, "Scoring Matrices," Connexions, September 12, 2007, http://cnx.org/content/m11062/2.6/.
Chicago Manual of Style (Reference, in Author-Date style):
Cates, S. 2007. Scoring Matrices. Connexions, September 12, 2007. http://cnx.org/content/m11062/2.6/.
Modern Languages Association (MLA) Style Manual:
Cates, Susan. Scoring Matrices. Connexions. 12 Sep. 2007 <http://cnx.org/content/m11062/2.6/>.
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More about this content: Metadata | Version History
This work is licensed by Susan Cates under a Creative Commons Attribution License (CC-BY 1.0).
Last edited by Susan Cates on Sep 12, 2007 11:34 am GMT-5.