Connexions

Sections
You are here: Home » Content » Monte Carlo Simulations of Allele Frequencies

About: Monte Carlo Simulations of Allele Frequencies

Module by: Quoclinh Nguyen, Masakatsu Watanab e. E-mail the authors

View the content: Monte Carlo Simulations of Allele Frequencies

Metadata

Name: Monte Carlo Simulations of Allele Frequencies
ID: m13540
Language: English (en)
Summary: In this assignment you will apply Monte Carlo computer simulations to study the effects of genetic drift and selection pressure on a single locus with two alleles: “A” and “a”. You will be running these simulations on a computer using a simple simulation program written in Python (see appendix if this is not on your computer). Note that you do not need to know how to program in Python in order to do this lab. Each exercise will involve editing one or two lines at the top of the file and then running the simulation for a few minutes and analyzing the output
Subject: Science and Technology
Keywords: Allele, computational biology, modeling, python
License: Creative Commons Attribution License CC-BY 2.0
Authors: Quoclinh Nguyen (qnguyen5@ucmerced.edu), Masakatsu Watanab e (mwatanabe@ucmerced.edu)
Copyright Holders: Quoclinh Nguyen (qnguyen5@ucmerced.edu), Masakatsu Watanab e (mwatanabe@ucmerced.edu)
Maintainers: Quoclinh Nguyen (qnguyen5@ucmerced.edu), Masakatsu Watanab e (mwatanabe@ucmerced.edu)
Latest version: 1.4 (history)
First publication date: Mar 22, 2006 3:11 pm US/Central
Last revision to module: Mar 17, 2009 11:06 am GMT-5

Downloads

PDF: m13540_1.4.pdf PDF file, for viewing content offline and printing. Learn more.
EPUB: m13540_1.4.epub Electronic publication file, for viewing in handheld devices. Learn more.
XML: m13540_1.4.cnxml XML that defines the structure and contents of the module, minus any included media files. Can be reimported in the editing interface. Learn more.
Source Export ZIP: m13540_1.4.zip ZIP containing the module XML plus any included media files. Can be reimported in the editing interface. Learn more.
Offline ZIP: m13540_1.4_offline.zip An offline HTML copy of the content. Also includes XML, included media files, and other support files. Learn more.

Version History

Version: 1.4 Mar 17, 2009 11:06 am GMT-5 by Masakatsu Watanab e
Changes: 
Update links
Version: 1.3 Jun 24, 2007 1:31 pm GMT-5 by Masakatsu Watanab e
Changes: 
2nd update web link
Version: 1.2 Jun 24, 2007 1:29 pm GMT-5 by Masakatsu Watanab e
Changes: 
Update web link
Version: 1.1 Mar 29, 2006 10:46 am US/Central by Quoclinh Nguyen
Changes: 
none

How to Reuse and Attribute This Content

If you derive a copy of this content using a Connexions account and publish your version, proper attribution of the original work will be automatically done for you.

If you reuse this work elsewhere, in order to comply with the attribution requirements of the license (CC-BY 2.0), you must include

  • the authors' names: Quoclinh Nguyen, Masakatsu Watanabe
  • the title of the work: Monte Carlo Simulations of Allele Frequencies
  • the Connexions URL where the work can be found: http://cnx.org/content/m13540/1.4/

See the citation section below for examples you can copy.

How to Cite and Attribute This Content

The following citation styles comply with the attribution requirements for the license (CC-BY 2.0) of this work:

American Chemical Society (ACS) Style Guide:

Nguyen, Q.; Watanabe, M. Monte Carlo Simulations of Allele Frequencies, Connexions Web site. http://cnx.org/content/m13540/1.4/, Mar 17, 2009.

American Medical Assocation (AMA) Manual of Style:

Nguyen Q, Watanabe M. Monte Carlo Simulations of Allele Frequencies [Connexions Web site]. March 17, 2009. Available at: http://cnx.org/content/m13540/1.4/.

American Psychological Assocation (APA) Publication Manual:

Nguyen, Q., & Watanabe, M. (2009, March 17). Monte Carlo Simulations of Allele Frequencies. Retrieved from the Connexions Web site: http://cnx.org/content/m13540/1.4/

Chicago Manual of Style (Bibliography):

Nguyen, Quoclinh, and Masakatsu Watanabe. "Monte Carlo Simulations of Allele Frequencies." Connexions. March 17, 2009. http://cnx.org/content/m13540/1.4/.

Chicago Manual of Style (Note):

Quoclinh Nguyen and Masakatsu Watanabe, "Monte Carlo Simulations of Allele Frequencies," Connexions, March 17, 2009, http://cnx.org/content/m13540/1.4/.

Chicago Manual of Style (Reference, in Author-Date style):

Nguyen, Q., & Watanabe, M. 2009. Monte Carlo Simulations of Allele Frequencies. Connexions, March 17, 2009. http://cnx.org/content/m13540/1.4/.

Modern Languages Association (MLA) Style Manual:

Nguyen, Quoclinh, and Masakatsu Watanabe. Monte Carlo Simulations of Allele Frequencies. Connexions. 17 Mar. 2009 <http://cnx.org/content/m13540/1.4/>.